Archive Meta Data

Author(s)

Lasse M. Blaabjerg, Maher M. Kassem, Lydia L. Good, Nicolas Jonsson, Matteo Cagiada, Kristoffer E. Johansson, Wouter Boomsma, Amelie Stein, Kresten Lindorff-Larsen

Title

Supporting data for Blaabjerg et al.

Description

This data is supporting information for "Rapid protein stability prediction using deep learning representations" by Blaabjerg et al. All data related to RaSP predictions from the paper are available here: 

"rasp_preds_alphafold_UP000005640_9606_HUMAN_v2.zip"
RaSP predictions of all (23,391) human AlphaFoldDB UP000005640_9606_HUMAN_v2.tar protein structures in a ZIP file format.

"rasp_preds_alphafold_UP000005640_9606_HUMAN_v2_prism_dir.zip" 
RaSP predictions of all (23,391) human AlphaFoldDB UP000005640_9606_HUMAN_v2.tar protein structures in a ZIP file format, organized in PRISM tree-structured directories. Files are sorted into the tree-structured directories based on their UniProt accession numbers.
Example: RaSP prediction for P12345 will be in P1/23/45/. 

"rasp_preds_alphafold_UP000005640_9606_HUMAN_v2_vaex_dataframe.zip"
RaSP predictions of all (23,391) human AlphaFoldDB UP000005640_9606_HUMAN_v2.tar protein structures in one Vaex DataFrame. Vaex documentation is available here (https://vaex.readthedocs.io/en/latest/index.html).

"rasp_preds_exp_strucs_gnomad_clinvar.csv"
RaSP predictions of the selected experimental protein structures mapped to relevant gnomAD and ClinVar annotations.